Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm23750-201ENSMUST00000104222 132 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm14871-201ENSMUST00000119056 194 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm15803-201ENSMUST00000120118 394 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm15194-201ENSMUST00000120453 434 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm12422-201ENSMUST00000121431 302 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm24065-201ENSMUST00000157487 264 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm22596-201ENSMUST00000157601 316 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm20401-201ENSMUST00000173717 212 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Mir6921-201ENSMUST00000183719 80 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm27985-201ENSMUST00000185112 378 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm28683-201ENSMUST00000187134 615 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm28840-205ENSMUST00000189320 615 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm28835-203ENSMUST00000190062 615 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm8874-201ENSMUST00000196826 286 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm43596-201ENSMUST00000202818 884 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm23330-201ENSMUST00000082660 164 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm25682-201ENSMUST00000083942 164 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.92□□□□□ -1.62
Lima1Q9ERG0 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm8424-201ENSMUST00000117716 988 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm3943-201ENSMUST00000118606 718 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm16420-201ENSMUST00000120258 856 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm7670-201ENSMUST00000121272 641 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm37882-201ENSMUST00000195254 196 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm43315-201ENSMUST00000198120 313 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm17984-201ENSMUST00000205286 859 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm45777-201ENSMUST00000213009 301 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Thoc7-209ENSMUST00000225325 765 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm10145-201ENSMUST00000077776 462 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lima1Q9ERG0 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.9□□□□□ -1.62
Lima1Q9ERG0 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Lima1Q9ERG0 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Lima1Q9ERG0 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Lima1Q9ERG0 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Lima1Q9ERG0 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.9□□□□□ -1.62
Lima1Q9ERG0 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm14575-201ENSMUST00000117210 560 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm8595-201ENSMUST00000118250 630 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms