Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdc40Q9DC48 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm22266-201ENSMUST00000104011 138 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm25383-201ENSMUST00000157810 144 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm23115-201ENSMUST00000158480 108 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm28353-201ENSMUST00000186482 570 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm28533-201ENSMUST00000186741 570 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm37631-201ENSMUST00000192275 364 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm34176-201ENSMUST00000192621 474 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm19189-201ENSMUST00000221689 754 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdc40Q9DC48 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm23274-201ENSMUST00000104056 130 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm24429-201ENSMUST00000104076 132 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm7206-201ENSMUST00000117730 508 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm13077-201ENSMUST00000121941 484 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm23327-201ENSMUST00000157420 78 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm23082-201ENSMUST00000157852 133 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm25846-201ENSMUST00000158013 135 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm26993-201ENSMUST00000182766 789 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm2142-201ENSMUST00000197899 589 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm8911-201ENSMUST00000213986 652 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Gm23508-201ENSMUST00000083079 72 ntBASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdc40Q9DC48 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms