Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim42Q9D2H5 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim42Q9D2H5 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm26002-201ENSMUST00000101915 107 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm25725-201ENSMUST00000104528 130 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm22710-201ENSMUST00000116892 125 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm16394-201ENSMUST00000117289 675 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm15312-201ENSMUST00000118827 271 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm12447-201ENSMUST00000119110 470 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm14927-201ENSMUST00000120283 454 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm15309-201ENSMUST00000121644 240 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm23068-201ENSMUST00000158239 293 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm25898-201ENSMUST00000158303 106 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm23619-201ENSMUST00000178411 94 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm25474-201ENSMUST00000179052 94 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm22047-201ENSMUST00000179176 94 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm8245-201ENSMUST00000182434 987 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm5181-201ENSMUST00000183140 971 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29650-201ENSMUST00000188485 742 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm45508-201ENSMUST00000209298 299 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 AC168062.2-201ENSMUST00000228907 422 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm20900-201ENSMUST00000078729 472 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm25852-201ENSMUST00000082790 130 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim42Q9D2H5 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.54□□□□□ -1.36
Trim42Q9D2H5 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim42Q9D2H5 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms