Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm43444-201ENSMUST00000198123 291 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm24525-201ENSMUST00000082917 151 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Gm26072-201ENSMUST00000083135 107 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Mir449a-201ENSMUST00000083641 91 ntBASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Vps28Q9D1C8 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm8595-201ENSMUST00000118250 630 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm13887-201ENSMUST00000119009 344 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm12988-201ENSMUST00000119054 478 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm11825-201ENSMUST00000120710 736 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm14776-201ENSMUST00000121029 887 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm12041-201ENSMUST00000121606 602 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm22106-201ENSMUST00000122544 127 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm3160-201ENSMUST00000128343 607 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm24295-201ENSMUST00000158298 131 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm10087-201ENSMUST00000167650 330 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Mir3110-201ENSMUST00000175053 80 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Mir6971-201ENSMUST00000183497 63 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Mir7020-201ENSMUST00000183787 70 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm38360-201ENSMUST00000195130 454 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm19921-201ENSMUST00000210505 703 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm7688-201ENSMUST00000212857 337 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm18043-201ENSMUST00000216741 739 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm6474-201ENSMUST00000223250 699 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Gm25739-201ENSMUST00000082886 107 ntBASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Vps28Q9D1C8 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Gm15803-201ENSMUST00000120118 394 ntBASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Gm14601-201ENSMUST00000120892 236 ntBASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Gm7350-201ENSMUST00000120964 636 ntBASIC5.49□□□□□ -1.53
Vps28Q9D1C8 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 225.7 ms