Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ddx56Q9D0R4 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm7646-201ENSMUST00000198590 1346 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm24709-201ENSMUST00000104123 132 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm14267-201ENSMUST00000119751 496 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm11325-201ENSMUST00000119967 469 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm9001-201ENSMUST00000121642 399 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm22492-201ENSMUST00000157192 297 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm9597-201ENSMUST00000171913 602 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm24300-201ENSMUST00000177809 109 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm24017-201ENSMUST00000178726 109 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm23952-201ENSMUST00000179380 109 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm21991-201ENSMUST00000180006 508 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm27964-201ENSMUST00000185195 62 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm44768-201ENSMUST00000205719 393 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm19900-201ENSMUST00000207285 576 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm6068-201ENSMUST00000222270 387 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Ddx56Q9D0R4 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm25414-201ENSMUST00000101814 107 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm14750-201ENSMUST00000118262 516 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm13772-201ENSMUST00000118431 317 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm11852-201ENSMUST00000120806 222 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm24965-201ENSMUST00000157922 106 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm22932-201ENSMUST00000175510 72 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm21756-201ENSMUST00000178380 930 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm21405-201ENSMUST00000179024 930 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm28637-201ENSMUST00000179424 345 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm27036-201ENSMUST00000182465 980 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Gm4832-201ENSMUST00000182679 399 ntBASIC6.05□□□□□ -1.44
Ddx56Q9D0R4 Mir6952-201ENSMUST00000185092 61 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms