Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm6057-201ENSMUST00000195927 314 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Mir6516-201ENSMUST00000196236 110 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm11774-201ENSMUST00000118601 293 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm14985-201ENSMUST00000118693 786 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm12734-201ENSMUST00000120228 948 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm25291-201ENSMUST00000122795 144 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm26312-201ENSMUST00000157769 165 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm23855-201ENSMUST00000158377 135 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm25019-201ENSMUST00000179732 110 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm27754-201ENSMUST00000183340 126 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm37336-202ENSMUST00000193705 468 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm21112-201ENSMUST00000212224 578 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm7760-201ENSMUST00000212265 578 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm7807-201ENSMUST00000212475 578 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm9386-201ENSMUST00000095195 381 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.84□□□□□ -1.47
Smc1aQ9CU62 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Smc1aQ9CU62 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Smc1aQ9CU62 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm12641-201ENSMUST00000117874 985 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm11975-201ENSMUST00000118772 481 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm11507-201ENSMUST00000156462 412 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm23546-201ENSMUST00000158211 137 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm22923-201ENSMUST00000174952 110 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm22411-201ENSMUST00000175462 126 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm22002-201ENSMUST00000175622 125 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm27266-201ENSMUST00000184521 123 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm2914-201ENSMUST00000186120 328 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm28683-201ENSMUST00000187134 615 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm28840-205ENSMUST00000189320 615 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm28835-203ENSMUST00000190062 615 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm37631-201ENSMUST00000192275 364 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm44673-201ENSMUST00000205692 996 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Mir30b-201ENSMUST00000083542 96 ntBASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.83□□□□□ -1.48
Smc1aQ9CU62 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms