Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm15779-201ENSMUST00000117470 412 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm11975-201ENSMUST00000118772 481 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm15428-201ENSMUST00000121352 333 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm12422-201ENSMUST00000121431 302 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm24719-201ENSMUST00000157520 110 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm37996-201ENSMUST00000191859 367 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm38131-201ENSMUST00000192449 430 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm42542-201ENSMUST00000197978 268 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm9480-201ENSMUST00000198038 616 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm6261-201ENSMUST00000204707 760 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm8039-201ENSMUST00000204758 712 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm26330-201ENSMUST00000082817 104 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm10221-201ENSMUST00000088299 309 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Use1Q9CQ56 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.79□□□□□ -1.64
Use1Q9CQ56 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Use1Q9CQ56 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm12039-201ENSMUST00000118219 180 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm7657-201ENSMUST00000118851 666 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm11866-201ENSMUST00000120209 335 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm13787-201ENSMUST00000120422 168 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm15388-201ENSMUST00000121578 726 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm25290-201ENSMUST00000122796 144 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm24402-201ENSMUST00000157873 91 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm24940-201ENSMUST00000158326 108 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm6808-201ENSMUST00000162341 807 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm6632-201ENSMUST00000168425 954 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm18828-202ENSMUST00000181035 310 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Mir7082-201ENSMUST00000183526 92 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Mir7087-201ENSMUST00000184840 70 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm29813-201ENSMUST00000195856 447 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm6057-201ENSMUST00000195927 314 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm43215-201ENSMUST00000199108 252 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm3148-201ENSMUST00000203594 612 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm44091-201ENSMUST00000205212 649 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm45215-201ENSMUST00000206407 395 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm38574-201ENSMUST00000211855 640 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Use1Q9CQ56 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Use1Q9CQ56 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Use1Q9CQ56 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Use1Q9CQ56 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms