Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm29486-201ENSMUST00000088648 372 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm6419-201ENSMUST00000097166 429 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.07□□□□□ -1.28
Trim11Q99PQ2 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim11Q99PQ2 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm14912-201ENSMUST00000120166 1773 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm26289-201ENSMUST00000104169 131 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Igkv13-87-201ENSMUST00000114214 286 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm26156-201ENSMUST00000116999 123 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm2199-201ENSMUST00000119065 874 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm13473-201ENSMUST00000119289 367 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm13162-201ENSMUST00000121481 454 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm15388-201ENSMUST00000121578 726 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm23553-201ENSMUST00000157817 295 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm22101-201ENSMUST00000157928 103 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm7316-201ENSMUST00000165395 445 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm5929-201ENSMUST00000166883 487 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Mir5107-201ENSMUST00000175586 88 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm29216-201ENSMUST00000187117 492 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm38122-201ENSMUST00000192679 885 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm18900-201ENSMUST00000193218 584 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm44856-201ENSMUST00000206639 304 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm18672-201ENSMUST00000208035 270 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm45473-201ENSMUST00000211452 616 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm19168-201ENSMUST00000218804 1091 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 AC155929.1-201ENSMUST00000220217 1276 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm22300-201ENSMUST00000082661 126 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm25410-201ENSMUST00000083758 137 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim11Q99PQ2 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms