Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm9202-201ENSMUST00000223036 437 ntBASIC5.33□□□□□ -1.56
Msh4Q99MT2 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.33□□□□□ -1.56
Msh4Q99MT2 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.33□□□□□ -1.56
Msh4Q99MT2 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.33□□□□□ -1.56
Msh4Q99MT2 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msh4Q99MT2 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm26300-201ENSMUST00000102282 94 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Mir1192-201ENSMUST00000116976 121 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm15531-201ENSMUST00000118062 252 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm11369-201ENSMUST00000120812 318 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm14122-201ENSMUST00000122076 973 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm5401-201ENSMUST00000122444 365 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm28883-201ENSMUST00000189256 369 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm28188-201ENSMUST00000190483 236 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm18702-201ENSMUST00000196923 588 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm44395-201ENSMUST00000197056 153 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm43054-201ENSMUST00000199495 884 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm45034-201ENSMUST00000206831 482 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm45249-201ENSMUST00000211021 348 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm20948-201ENSMUST00000211091 449 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm45874-201ENSMUST00000212423 346 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Snora30-201ENSMUST00000083325 130 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm5583-201ENSMUST00000174328 1519 ntBASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msh4Q99MT2 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm15779-201ENSMUST00000117470 412 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm12901-201ENSMUST00000118690 532 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm4342-201ENSMUST00000118982 367 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm11699-201ENSMUST00000119016 401 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm23387-201ENSMUST00000158586 107 ntBASIC5.31□□□□□ -1.56
Msh4Q99MT2 Gm23774-201ENSMUST00000158990 131 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms