Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm15781-201ENSMUST00000120216 323 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm13578-201ENSMUST00000120849 590 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm7931-201ENSMUST00000121537 271 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm13531-201ENSMUST00000121893 543 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm14970-201ENSMUST00000122289 355 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm16164-201ENSMUST00000160078 468 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm17366-201ENSMUST00000167629 187 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm37550-201ENSMUST00000193230 463 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm22897-202ENSMUST00000197782 127 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm45189-201ENSMUST00000208567 363 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AV026068-216ENSMUST00000223874 328 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AV026068-218ENSMUST00000223980 575 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm8412-201ENSMUST00000077493 440 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm22684-201ENSMUST00000082849 132 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm23452-201ENSMUST00000083327 107 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm26144-201ENSMUST00000104475 132 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm14899-201ENSMUST00000118673 548 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm23025-201ENSMUST00000158769 111 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm23050-201ENSMUST00000158775 165 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm26057-201ENSMUST00000178099 165 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm26365-201ENSMUST00000179177 94 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Mir7046-201ENSMUST00000183435 66 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Mir6362-201ENSMUST00000184329 107 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm29124-201ENSMUST00000186576 452 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm28414-201ENSMUST00000190111 294 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm2979-201ENSMUST00000193442 463 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm9236-201ENSMUST00000196892 587 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm4742-201ENSMUST00000200261 771 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm7639-201ENSMUST00000212608 484 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm36262-201ENSMUST00000223274 499 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms