Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm28503-201ENSMUST00000185966 147 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm19231-201ENSMUST00000193212 830 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Mir1892-201ENSMUST00000197752 80 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm42625-201ENSMUST00000198611 922 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm20948-201ENSMUST00000211091 449 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm18585-201ENSMUST00000215197 556 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm23508-201ENSMUST00000083079 72 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Mir449a-201ENSMUST00000083641 91 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm25313-201ENSMUST00000101817 116 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Mir466j-201ENSMUST00000116876 122 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm14769-201ENSMUST00000118590 432 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm3943-201ENSMUST00000118606 718 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm11387-201ENSMUST00000120266 772 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm23287-201ENSMUST00000179427 116 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm23143-201ENSMUST00000180137 116 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Mir7087-201ENSMUST00000184840 70 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28943-201ENSMUST00000186187 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28736-201ENSMUST00000186257 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm29401-201ENSMUST00000186690 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm29178-204ENSMUST00000186784 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28589-201ENSMUST00000186991 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28936-201ENSMUST00000187153 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm29121-201ENSMUST00000187611 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28243-201ENSMUST00000187801 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28844-202ENSMUST00000187977 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm29058-201ENSMUST00000189510 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm19029-201ENSMUST00000189923 564 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm29624-201ENSMUST00000190018 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28780-201ENSMUST00000190223 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28969-211ENSMUST00000190992 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm28990-207ENSMUST00000191219 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm37503-201ENSMUST00000192088 319 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm36468-201ENSMUST00000192119 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm31572-201ENSMUST00000193341 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm30175-201ENSMUST00000194173 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm30858-201ENSMUST00000195516 615 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm6543-201ENSMUST00000197353 808 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm45722-201ENSMUST00000213075 466 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm6841-201ENSMUST00000220602 598 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm24871-201ENSMUST00000083099 116 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Rnu5g-201ENSMUST00000093721 116 ntBASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Brf1Q8CFK2 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms