Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm44376-201ENSMUST00000197570 128 ntBASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm4714-201ENSMUST00000203395 279 ntBASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Ccdc38Q8CDN8 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm14711-201ENSMUST00000117056 217 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm15185-201ENSMUST00000117397 746 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm24295-201ENSMUST00000158298 131 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm24940-201ENSMUST00000158326 108 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm25907-201ENSMUST00000158486 125 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm6055-201ENSMUST00000180532 378 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm18802-201ENSMUST00000186270 888 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm29755-201ENSMUST00000196976 948 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm43054-201ENSMUST00000199495 884 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm2645-201ENSMUST00000223516 547 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Mir504-201ENSMUST00000093602 79 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc38Q8CDN8 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm11975-201ENSMUST00000118772 481 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm23171-201ENSMUST00000157159 264 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm22596-201ENSMUST00000157601 316 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm17711-201ENSMUST00000172028 237 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm25037-201ENSMUST00000175418 110 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm27854-201ENSMUST00000175578 244 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm28604-201ENSMUST00000186629 484 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm28566-201ENSMUST00000186714 484 ntBASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc38Q8CDN8 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms