Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm5401-201ENSMUST00000122444 365 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm23964-201ENSMUST00000157966 107 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm5139-201ENSMUST00000175943 249 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Mir7012-201ENSMUST00000183900 64 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm2011-203ENSMUST00000203750 435 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Mir1188-201ENSMUST00000116756 120 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm25906-201ENSMUST00000158489 126 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm20545-201ENSMUST00000174739 210 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm44221-201ENSMUST00000203552 388 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm32536-201ENSMUST00000205209 445 ntBASIC5.09□□□□□ -1.59
Trub1Q8C0D0 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trub1Q8C0D0 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trub1Q8C0D0 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trub1Q8C0D0 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trub1Q8C0D0 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.09□□□□□ -1.6
Trub1Q8C0D0 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.09□□□□□ -1.6
Trub1Q8C0D0 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm14575-201ENSMUST00000117210 560 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm13451-201ENSMUST00000117649 592 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm14082-201ENSMUST00000118582 801 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm15012-201ENSMUST00000119176 106 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm13787-201ENSMUST00000120422 168 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm16259-201ENSMUST00000145241 553 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm25824-201ENSMUST00000157092 121 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm24931-201ENSMUST00000158324 107 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm17044-201ENSMUST00000168549 828 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm10292-202ENSMUST00000193165 585 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm24166-201ENSMUST00000082724 135 ntBASIC5.08□□□□□ -1.6
Trub1Q8C0D0 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms