Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24235-201ENSMUST00000104319 129 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm13787-201ENSMUST00000120422 168 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm23902-201ENSMUST00000157571 134 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm26355-201ENSMUST00000158220 105 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Trbv10-201ENSMUST00000168322 289 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm2914-201ENSMUST00000186120 328 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm29148-201ENSMUST00000188140 336 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm37445-201ENSMUST00000195318 242 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm2622-201ENSMUST00000200018 471 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 LOC665443-201ENSMUST00000212284 796 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc40Q8BI79 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm13245-201ENSMUST00000119646 260 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm22420-201ENSMUST00000178795 126 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm25818-201ENSMUST00000083282 164 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc40Q8BI79 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc40Q8BI79 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms