Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 AC164297.4-201ENSMUST00000224225 1307 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Ubfd1Q78JW9 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.46□□□□□ -1.53
Ubfd1Q78JW9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Ubfd1Q78JW9 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ubfd1Q78JW9 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm23750-201ENSMUST00000104222 132 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm10936-201ENSMUST00000105264 252 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm12889-201ENSMUST00000118684 241 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm13887-201ENSMUST00000119009 344 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm9440-201ENSMUST00000119667 539 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm5383-201ENSMUST00000121177 617 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm12322-201ENSMUST00000121605 389 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm25525-201ENSMUST00000177701 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm26178-201ENSMUST00000177706 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm26465-201ENSMUST00000178517 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm24317-201ENSMUST00000178536 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm25021-201ENSMUST00000179184 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm22995-201ENSMUST00000179670 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm24424-201ENSMUST00000179714 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm24389-201ENSMUST00000179962 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm25672-201ENSMUST00000180111 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm29163-201ENSMUST00000188029 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm9332-201ENSMUST00000198431 730 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm44539-201ENSMUST00000206010 238 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm44580-201ENSMUST00000206333 877 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm17987-201ENSMUST00000206902 603 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm7045-201ENSMUST00000221466 605 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm18940-201ENSMUST00000222518 871 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm22807-201ENSMUST00000082737 129 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm23815-201ENSMUST00000083231 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm23520-201ENSMUST00000093736 107 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubfd1Q78JW9 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ubfd1Q78JW9 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms