Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Gm23242-201ENSMUST00000083055 107 ntBASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Gm23686-201ENSMUST00000083241 164 ntBASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Gm24917-201ENSMUST00000083935 104 ntBASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scaf4Q6PFF0 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
Scaf4Q6PFF0 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Scaf4Q6PFF0 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.96□□□□□ -1.45
Scaf4Q6PFF0 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scaf4Q6PFF0 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Scaf4Q6PFF0 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm15216-201ENSMUST00000118058 277 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm13473-201ENSMUST00000119289 367 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm6987-201ENSMUST00000119319 428 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm23867-201ENSMUST00000122649 274 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm16269-201ENSMUST00000160532 409 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm16134-201ENSMUST00000161714 336 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm17060-201ENSMUST00000172394 824 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm21171-201ENSMUST00000180048 673 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm29383-201ENSMUST00000188284 480 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm37219-201ENSMUST00000192036 926 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm29736-201ENSMUST00000198189 385 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm44952-201ENSMUST00000204443 433 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm6702-201ENSMUST00000208496 471 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.96□□□□□ -1.46
Scaf4Q6PFF0 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms