Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42551-201ENSMUST00000197701 1573 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 AC158988.1-201ENSMUST00000226731 2624 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm44185-201ENSMUST00000204539 3307 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm15452-201ENSMUST00000119877 240 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm13537-201ENSMUST00000120467 267 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm23662-201ENSMUST00000158046 111 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm17054-201ENSMUST00000169811 259 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm37616-201ENSMUST00000193974 322 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm37719-201ENSMUST00000194615 292 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm37341-201ENSMUST00000194680 371 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm36986-201ENSMUST00000195320 353 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Igkv4-56-201ENSMUST00000198436 349 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm17991-201ENSMUST00000208139 297 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 LOC665443-201ENSMUST00000212284 796 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Olfr923-204ENSMUST00000219798 1068 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm2099-201ENSMUST00000220979 412 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 AC158982.2-201ENSMUST00000226283 184 ntBASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim41Q5NCC3 Gm43728-201ENSMUST00000198817 2622 ntBASIC11.46□□□□□ -0.58
Trim41Q5NCC3 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim41Q5NCC3 Gm45001-201ENSMUST00000208279 2515 ntBASIC11.46□□□□□ -0.58
Trim41Q5NCC3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim41Q5NCC3 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm37310-201ENSMUST00000195237 2968 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm42568-201ENSMUST00000195639 1841 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm14172-201ENSMUST00000118255 644 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm11252-201ENSMUST00000120572 939 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm11894-201ENSMUST00000121579 328 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm2343-201ENSMUST00000161177 1042 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm25534-201ENSMUST00000175365 125 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm18700-201ENSMUST00000185791 553 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Mir188-201ENSMUST00000083464 68 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Gm44625-201ENSMUST00000207838 1561 ntBASIC11.45□□□□□ -0.58
Trim41Q5NCC3 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim41Q5NCC3 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm25445-201ENSMUST00000158996 299 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm27999-201ENSMUST00000183539 193 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Mir6975-201ENSMUST00000184879 61 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm28080-201ENSMUST00000188552 722 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 AC153961.2-201ENSMUST00000218877 164 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 AC121978.1-201ENSMUST00000228357 380 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Gm23975-201ENSMUST00000082685 106 ntBASIC11.44□□□□□ -0.58
Trim41Q5NCC3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim41Q5NCC3 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms