Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm31572-201ENSMUST00000193341 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm30175-201ENSMUST00000194173 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Trbv24-201ENSMUST00000194614 347 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm30858-201ENSMUST00000195516 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm35013-201ENSMUST00000197218 832 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm43345-201ENSMUST00000199484 269 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm18325-201ENSMUST00000203228 835 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm7039-201ENSMUST00000205138 346 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm4032-201ENSMUST00000210886 487 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm5119-201ENSMUST00000215858 634 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm9321-201ENSMUST00000221179 778 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm35558-202ENSMUST00000221819 499 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.36□□□□□ -1.55
Col8a1Q00780 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm24525-201ENSMUST00000082917 151 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm26111-201ENSMUST00000083969 106 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm16082-201ENSMUST00000115992 377 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm12837-201ENSMUST00000120131 373 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm15388-201ENSMUST00000121578 726 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm22311-201ENSMUST00000158006 110 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm24731-201ENSMUST00000158227 131 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm17919-201ENSMUST00000173344 312 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm23632-201ENSMUST00000175289 125 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm36935-201ENSMUST00000192526 292 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm36953-201ENSMUST00000195295 268 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm31230-201ENSMUST00000199725 785 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm3148-201ENSMUST00000203594 612 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm25403-201ENSMUST00000082971 143 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.35□□□□□ -1.55
Col8a1Q00780 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms