Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm37913-201ENSMUST00000192925 2544 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
PrkdcP97313 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm11829-201ENSMUST00000121003 282 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Gm24251-201ENSMUST00000157324 114 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Gm42566-201ENSMUST00000197120 643 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Gm44824-201ENSMUST00000207021 229 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC3.34□□□□□ -1.88
PrkdcP97313 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 AC129935.1-201ENSMUST00000226302 873 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
PrkdcP97313 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
PrkdcP97313 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
PrkdcP97313 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PrkdcP97313 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm42781-201ENSMUST00000201317 2719 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
PrkdcP97313 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm44193-201ENSMUST00000204822 2523 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm24751-201ENSMUST00000157844 102 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Mir6408-201ENSMUST00000183643 91 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 Gm17780-201ENSMUST00000207142 612 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 AC159886.1-201ENSMUST00000217099 1091 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.34□□□□□ -1.88
PrkdcP97313 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PrkdcP97313 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
PrkdcP97313 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm25376-201ENSMUST00000104340 133 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm16107-201ENSMUST00000162523 862 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm43039-201ENSMUST00000202883 963 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm45112-201ENSMUST00000208576 5125 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PrkdcP97313 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 n-R5s98-201ENSMUST00000122549 119 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm24939-201ENSMUST00000158325 137 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm27695-201ENSMUST00000184301 91 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm7807-201ENSMUST00000212475 578 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PrkdcP97313 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm37766-201ENSMUST00000192244 2567 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm5757-201ENSMUST00000117494 528 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm14103-201ENSMUST00000119075 366 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm13815-201ENSMUST00000119963 412 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm20549-201ENSMUST00000174804 429 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm25817-201ENSMUST00000177758 121 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm24766-201ENSMUST00000179182 121 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm21638-201ENSMUST00000179473 836 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PrkdcP97313 Gm2522-201ENSMUST00000204280 322 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 AC122035.2-201ENSMUST00000228698 462 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 AC160029.1-201ENSMUST00000219628 2678 ntBASIC3.33□□□□□ -1.88
PrkdcP97313 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms