Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm42843-201ENSMUST00000196328 3616 ntBASIC7.66□□□□□ -1.18
Cux1P53564 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Cux1P53564 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Cux1P53564 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Cux1P53564 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Cux1P53564 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cux1P53564 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cux1P53564 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Cux1P53564 AC102431.1-201ENSMUST00000223773 1449 ntBASIC7.65□□□□□ -1.18
Cux1P53564 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Cux1P53564 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cux1P53564 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cux1P53564 Gm16107-201ENSMUST00000162523 862 ntBASIC7.65□□□□□ -1.18
Cux1P53564 Gm22395-201ENSMUST00000177427 96 ntBASIC7.65□□□□□ -1.18
Cux1P53564 Mir6960-201ENSMUST00000183449 61 ntBASIC7.65□□□□□ -1.18
Cux1P53564 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC7.65□□□□□ -1.18
Cux1P53564 Gm37167-201ENSMUST00000194946 396 ntBASIC7.65□□□□□ -1.18
Cux1P53564 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC7.65□□□□□ -1.18
Cux1P53564 AC154198.1-201ENSMUST00000222839 424 ntBASIC7.65□□□□□ -1.18
Cux1P53564 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Cux1P53564 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Cux1P53564 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Cux1P53564 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
Cux1P53564 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Cux1P53564 Gm45644-201ENSMUST00000210255 2740 ntBASIC7.65□□□□□ -1.19
Cux1P53564 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Cux1P53564 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Cux1P53564 AC121844.3-201ENSMUST00000219124 1785 ntBASIC7.65□□□□□ -1.19
Cux1P53564 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cux1P53564 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cux1P53564 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cux1P53564 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cux1P53564 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Cux1P53564 Gm14628-201ENSMUST00000117508 635 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm7312-201ENSMUST00000118798 469 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm11584-201ENSMUST00000120636 325 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm6155-201ENSMUST00000173735 341 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Cux1P53564 Gm8221-201ENSMUST00000178052 564 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Cux1P53564 Mir6344-201ENSMUST00000183462 104 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC7.64□□□□□ -1.19
Cux1P53564 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC7.64□□□□□ -1.19
Cux1P53564 AC131720.3-201ENSMUST00000219113 275 ntBASIC7.64□□□□□ -1.19
Cux1P53564 AC098742.1-201ENSMUST00000227945 373 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Mecom-201ENSMUST00000061088 348 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC7.64□□□□□ -1.19
Cux1P53564 Gm42615-201ENSMUST00000197704 1820 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Cux1P53564 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Cux1P53564 Gm37099-201ENSMUST00000191902 3451 ntBASIC7.64□□□□□ -1.19
Cux1P53564 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Cux1P53564 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC7.64□□□□□ -1.19
Cux1P53564 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Cux1P53564 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC7.63□□□□□ -1.19
Cux1P53564 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Cux1P53564 Gm22177-201ENSMUST00000175002 158 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC7.63□□□□□ -1.19
Cux1P53564 Gm27883-201ENSMUST00000183941 102 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm5734-201ENSMUST00000189787 913 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm18426-201ENSMUST00000191874 973 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm37243-201ENSMUST00000193407 595 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm44648-201ENSMUST00000208267 329 ntBASIC7.63□□□□□ -1.19
Cux1P53564 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Cux1P53564 AC166902.1-201ENSMUST00000216653 517 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm6988-201ENSMUST00000222676 375 ntBASIC7.63□□□□□ -1.19
Cux1P53564 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Cux1P53564 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Cux1P53564 Snora30-201ENSMUST00000083325 130 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm29112-201ENSMUST00000188962 3487 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Cux1P53564 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Cux1P53564 Gm11251-201ENSMUST00000119593 2800 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC7.63□□□□□ -1.19
Cux1P53564 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Cux1P53564 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Cux1P53564 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Cux1P53564 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC7.63□□□□□ -1.19
Cux1P53564 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.63□□□□□ -1.19
Cux1P53564 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Gm43121-201ENSMUST00000199065 1305 ntBASIC7.63□□□□□ -1.19
Cux1P53564 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Cux1P53564 Gm12131-201ENSMUST00000117479 359 ntBASIC7.62□□□□□ -1.19
Cux1P53564 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC7.62□□□□□ -1.19
Cux1P53564 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
Cux1P53564 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC7.62□□□□□ -1.19
Cux1P53564 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.62□□□□□ -1.19
Cux1P53564 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Apoo-ps-201ENSMUST00000061241 586 ntBASIC7.62□□□□□ -1.19
Cux1P53564 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Cux1P53564 Gm9700-201ENSMUST00000193786 1617 ntBASIC7.62□□□□□ -1.19
Cux1P53564 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
Cux1P53564 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Cux1P53564 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC7.62□□□□□ -1.19
Cux1P53564 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms