Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24170-201ENSMUST00000104124 133 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm13007-201ENSMUST00000121866 365 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm25176-201ENSMUST00000122640 125 ntBASIC6.13□□□□□ -1.43
Traf1P39428 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Gm25669-201ENSMUST00000157699 112 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm22725-201ENSMUST00000158092 110 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm22923-201ENSMUST00000174952 110 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Traf1P39428 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.13□□□□□ -1.43
Traf1P39428 Mir7012-201ENSMUST00000183900 64 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Mir6412-201ENSMUST00000184477 97 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Mir6400-201ENSMUST00000184870 92 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm18802-201ENSMUST00000186270 888 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm28803-201ENSMUST00000190385 764 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm36638-201ENSMUST00000193295 400 ntBASIC6.13□□□□□ -1.43
Traf1P39428 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.13□□□□□ -1.43
Traf1P39428 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm44074-201ENSMUST00000204562 337 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.13□□□□□ -1.43
Traf1P39428 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.13□□□□□ -1.43
Traf1P39428 Gm20368-201ENSMUST00000220716 301 ntBASIC6.13□□□□□ -1.43
Traf1P39428 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.13□□□□□ -1.43
Traf1P39428 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.13□□□□□ -1.43
Traf1P39428 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Gm23508-201ENSMUST00000083079 72 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Traf1P39428 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Traf1P39428 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.13□□□□□ -1.43
Traf1P39428 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.13□□□□□ -1.43
Traf1P39428 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.12□□□□□ -1.43
Traf1P39428 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm24350-201ENSMUST00000104163 133 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Gm10241-201ENSMUST00000117664 286 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm11866-201ENSMUST00000120209 335 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm12110-201ENSMUST00000121601 579 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm12685-201ENSMUST00000121702 214 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Traf1P39428 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm29201-201ENSMUST00000189120 431 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm37503-201ENSMUST00000192088 319 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Gm8874-201ENSMUST00000196826 286 ntBASIC6.12□□□□□ -1.43
Traf1P39428 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Traf1P39428 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm45910-201ENSMUST00000212493 1003 ntBASIC6.12□□□□□ -1.43
Traf1P39428 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm8672-201ENSMUST00000221200 332 ntBASIC6.12□□□□□ -1.43
Traf1P39428 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.12□□□□□ -1.43
Traf1P39428 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Traf1P39428 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Traf1P39428 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Traf1P39428 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Traf1P39428 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm23514-201ENSMUST00000082827 130 ntBASIC6.12□□□□□ -1.43
Traf1P39428 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Traf1P39428 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Traf1P39428 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Traf1P39428 Gm43784-201ENSMUST00000202922 2436 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Traf1P39428 Gm18719-201ENSMUST00000196696 1413 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Traf1P39428 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Traf1P39428 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC6.11□□□□□ -1.43
Traf1P39428 Gm15766-201ENSMUST00000118025 813 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Gm14175-201ENSMUST00000119835 241 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Traf1P39428 Mir3062-201ENSMUST00000174986 105 ntBASIC6.11□□□□□ -1.43
Traf1P39428 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms