Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lire1P11260 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Lire1P11260 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm23910-201ENSMUST00000104597 132 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Gm12231-201ENSMUST00000119447 695 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm8545-201ENSMUST00000120692 801 ntBASIC5.3□□□□□ -1.56
Lire1P11260 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Gm14349-201ENSMUST00000137155 902 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm23499-201ENSMUST00000157736 268 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm23662-201ENSMUST00000158046 111 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm23224-201ENSMUST00000158122 271 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm23631-201ENSMUST00000175291 123 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm21654-201ENSMUST00000188086 691 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm21617-201ENSMUST00000188297 691 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Gm38185-201ENSMUST00000193195 694 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm22897-201ENSMUST00000197860 128 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.3□□□□□ -1.56
Lire1P11260 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Gm5886-202ENSMUST00000203957 522 ntBASIC5.3□□□□□ -1.56
Lire1P11260 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Gm44795-201ENSMUST00000205496 319 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm18329-201ENSMUST00000215832 589 ntBASIC5.3□□□□□ -1.56
Lire1P11260 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm3086-202ENSMUST00000221248 310 ntBASIC5.3□□□□□ -1.56
Lire1P11260 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.3□□□□□ -1.56
Lire1P11260 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.3□□□□□ -1.56
Lire1P11260 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lire1P11260 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Lire1P11260 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lire1P11260 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Lire1P11260 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Lire1P11260 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lire1P11260 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.3□□□□□ -1.56
Lire1P11260 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.3□□□□□ -1.56
Lire1P11260 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Lire1P11260 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Lire1P11260 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Lire1P11260 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm23692-201ENSMUST00000101881 160 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Gm8501-201ENSMUST00000117684 432 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm12303-201ENSMUST00000119506 673 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm13493-201ENSMUST00000120318 493 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm12650-201ENSMUST00000121966 258 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm15335-201ENSMUST00000122442 411 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm23781-201ENSMUST00000157940 308 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm8367-201ENSMUST00000186145 887 ntBASIC5.29□□□□□ -1.56
Lire1P11260 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.29□□□□□ -1.56
Lire1P11260 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm43054-201ENSMUST00000199495 884 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm32453-201ENSMUST00000204183 456 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Gm45367-201ENSMUST00000210171 347 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms