Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22468-201ENSMUST00000116680 120 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm26248-201ENSMUST00000116700 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm26137-201ENSMUST00000116701 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm26190-201ENSMUST00000116704 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24617-201ENSMUST00000116705 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm25778-201ENSMUST00000116713 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm25774-201ENSMUST00000116717 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22102-201ENSMUST00000116730 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm23177-201ENSMUST00000116784 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24193-201ENSMUST00000116801 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24744-201ENSMUST00000116833 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24427-201ENSMUST00000116896 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22346-201ENSMUST00000116918 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm23606-201ENSMUST00000116938 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22029-201ENSMUST00000116940 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm26298-201ENSMUST00000116956 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm23844-201ENSMUST00000116959 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24484-201ENSMUST00000117009 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm25347-201ENSMUST00000117026 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22112-201ENSMUST00000117032 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm14485-201ENSMUST00000119489 493 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm12140-201ENSMUST00000121214 544 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm23965-201ENSMUST00000157969 142 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22724-201ENSMUST00000158091 127 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Trbv10-201ENSMUST00000168322 289 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22991-201ENSMUST00000178126 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm25754-201ENSMUST00000178653 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm22419-201ENSMUST00000178780 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24802-201ENSMUST00000178897 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm25208-201ENSMUST00000178964 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm24567-201ENSMUST00000179294 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm23943-201ENSMUST00000179712 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm25228-201ENSMUST00000180121 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm23304-201ENSMUST00000180209 121 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm29376-201ENSMUST00000189357 835 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm18426-201ENSMUST00000191874 973 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm37189-201ENSMUST00000192131 298 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm6543-201ENSMUST00000197353 808 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm19936-201ENSMUST00000216414 838 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 AC124408.2-201ENSMUST00000228168 645 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Hmgb3O54879 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Hmgb3O54879 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb3O54879 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.01□□□□□ -1.77
Hmgb3O54879 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Gm42842-201ENSMUST00000197736 3004 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms