Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm28976-201ENSMUST00000188070 144 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm28190-201ENSMUST00000189766 722 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm17934-201ENSMUST00000192818 422 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm22897-202ENSMUST00000197782 127 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm44058-201ENSMUST00000204335 467 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NpcdF8VQB8 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NpcdF8VQB8 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm5341-201ENSMUST00000058881 489 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm22300-201ENSMUST00000082661 126 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Gm23238-201ENSMUST00000083007 164 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NpcdF8VQB8 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC7.3□□□□□ -1.24
NpcdF8VQB8 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NpcdF8VQB8 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm23750-201ENSMUST00000104222 132 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm25507-201ENSMUST00000116981 144 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm9429-201ENSMUST00000117804 868 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm6744-201ENSMUST00000119303 543 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm15379-201ENSMUST00000121224 648 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm13508-201ENSMUST00000121639 775 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm22492-201ENSMUST00000157192 297 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm24295-201ENSMUST00000158298 131 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm20885-201ENSMUST00000190192 654 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm17981-201ENSMUST00000191109 739 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm37193-201ENSMUST00000193087 513 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm29740-201ENSMUST00000193182 655 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm36866-201ENSMUST00000193343 657 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm36047-201ENSMUST00000193659 657 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm37758-201ENSMUST00000194275 629 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm20857-201ENSMUST00000194766 657 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm29950-201ENSMUST00000195273 237 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm20858-201ENSMUST00000195459 657 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm45082-201ENSMUST00000206082 601 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm17987-201ENSMUST00000206902 603 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm44909-201ENSMUST00000208756 165 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm18729-201ENSMUST00000217230 621 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 AC124549.1-201ENSMUST00000225912 333 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 AC115735.3-201ENSMUST00000227757 513 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 AC123665.4-201ENSMUST00000228790 249 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC7.29□□□□□ -1.24
NpcdF8VQB8 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NpcdF8VQB8 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NpcdF8VQB8 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NpcdF8VQB8 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NpcdF8VQB8 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC7.28□□□□□ -1.24
NpcdF8VQB8 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.28□□□□□ -1.24
NpcdF8VQB8 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NpcdF8VQB8 Gm7754-201ENSMUST00000223075 2064 ntBASIC7.28□□□□□ -1.24
NpcdF8VQB8 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NpcdF8VQB8 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms