Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Gm14775-201ENSMUST00000122089 310 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 Mir6907-201ENSMUST00000183764 71 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Gm38221-201ENSMUST00000195146 365 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.21□□□□□ -1.74
Col6a4A2AX52 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Snora52-201ENSMUST00000082732 137 ntBASIC4.21□□□□□ -1.74
Col6a4A2AX52 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a4A2AX52 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm44193-201ENSMUST00000204822 2523 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Mir761-201ENSMUST00000103245 76 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Scarna10-201ENSMUST00000158992 325 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm37961-201ENSMUST00000192729 299 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm44234-201ENSMUST00000204246 900 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm7093-201ENSMUST00000223004 581 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm9512-201ENSMUST00000223112 497 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Mecom-201ENSMUST00000061088 348 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm14878-201ENSMUST00000118167 293 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm11447-201ENSMUST00000118983 858 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm15603-201ENSMUST00000119252 492 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.2□□□□□ -1.74
Col6a4A2AX52 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a4A2AX52 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Col6a4A2AX52 AC120347.1-201ENSMUST00000223326 1639 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 AC125487.2-201ENSMUST00000219810 1300 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm16149-201ENSMUST00000117631 309 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm11617-201ENSMUST00000119609 639 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm22211-201ENSMUST00000158097 156 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm20614-201ENSMUST00000177106 632 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm9443-201ENSMUST00000188406 816 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm4321-201ENSMUST00000200520 442 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a4A2AX52 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a4A2AX52 AC129597.1-201ENSMUST00000223046 1234 ntBASIC4.19□□□□□ -1.74
Col6a4A2AX52 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms