Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28604-201ENSMUST00000186629 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28566-201ENSMUST00000186714 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28194-201ENSMUST00000187412 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28886-202ENSMUST00000187889 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28554-202ENSMUST00000189175 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29213-202ENSMUST00000189703 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28851-202ENSMUST00000189757 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28461-201ENSMUST00000190023 484 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm43044-201ENSMUST00000198091 379 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm44412-201ENSMUST00000203018 294 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm44074-201ENSMUST00000204562 337 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm7768-201ENSMUST00000222988 597 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm23456-201ENSMUST00000083335 137 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim3Q9R1R2 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms