Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm29161-201ENSMUST00000188250 699 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm44003-201ENSMUST00000203024 490 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm3148-201ENSMUST00000203594 612 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm18468-201ENSMUST00000207321 369 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm18470-201ENSMUST00000207467 420 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm18465-201ENSMUST00000207468 369 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm18464-201ENSMUST00000207803 420 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm18458-201ENSMUST00000207908 369 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm18461-201ENSMUST00000208421 420 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Snord65-201ENSMUST00000104269 72 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm23839-201ENSMUST00000116957 109 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm16089-201ENSMUST00000117679 336 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm11825-201ENSMUST00000120710 736 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm22312-201ENSMUST00000158005 130 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Mir5103-201ENSMUST00000175111 79 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm26993-201ENSMUST00000182766 789 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm2950-201ENSMUST00000185530 520 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm20368-201ENSMUST00000220716 301 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Smc1aQ9CU62 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm7079-201ENSMUST00000119726 171 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm15034-201ENSMUST00000120043 349 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm12317-201ENSMUST00000122307 319 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm25383-201ENSMUST00000157810 144 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm7609-204ENSMUST00000161424 461 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm17086-201ENSMUST00000171346 484 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm26731-201ENSMUST00000180683 543 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm27543-201ENSMUST00000183562 177 ntBASIC5.85□□□□□ -1.47
Smc1aQ9CU62 Gm27541-201ENSMUST00000184078 122 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 129.4 ms