Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.78□□□□□ -1.48
Trim8Q99PJ2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Gm24041-201ENSMUST00000083115 156 ntBASIC5.78□□□□□ -1.48
Trim8Q99PJ2 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim8Q99PJ2 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm22714-201ENSMUST00000116894 78 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm14163-201ENSMUST00000117342 217 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm11256-201ENSMUST00000118109 829 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm12090-201ENSMUST00000118692 758 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm14945-201ENSMUST00000119556 1118 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm11990-201ENSMUST00000121505 897 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm12396-201ENSMUST00000121600 306 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm14122-201ENSMUST00000122076 973 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm6673-201ENSMUST00000166114 700 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm4152-201ENSMUST00000172675 259 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm18588-201ENSMUST00000177308 492 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm5947-201ENSMUST00000179156 714 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm5645-201ENSMUST00000179597 714 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm8183-201ENSMUST00000183134 980 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Mir7046-201ENSMUST00000183435 66 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Mir7082-201ENSMUST00000183526 92 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm38237-201ENSMUST00000193366 376 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm5886-202ENSMUST00000203957 522 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm45189-201ENSMUST00000208567 363 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm45448-201ENSMUST00000211739 209 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm18405-201ENSMUST00000220743 511 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm23686-201ENSMUST00000083241 164 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim8Q99PJ2 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim8Q99PJ2 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.76□□□□□ -1.49
Trim8Q99PJ2 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.76□□□□□ -1.49
Trim8Q99PJ2 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
Trim8Q99PJ2 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim8Q99PJ2 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim8Q99PJ2 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms