Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm25345-201ENSMUST00000104505 133 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm15332-201ENSMUST00000118386 357 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm15385-201ENSMUST00000118725 667 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm7700-201ENSMUST00000120273 970 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm16463-201ENSMUST00000120527 721 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm12618-201ENSMUST00000121754 483 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm27512-201ENSMUST00000175328 126 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm38122-201ENSMUST00000192679 885 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm44312-201ENSMUST00000203536 469 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm29920-201ENSMUST00000206876 754 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm33178-201ENSMUST00000212090 257 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm7802-201ENSMUST00000216464 262 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm33312-201ENSMUST00000222443 332 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm23624-201ENSMUST00000082463 321 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm24200-201ENSMUST00000082955 157 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.59□□□□□ -1.51
Clrn1Q8K445 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Clrn1Q8K445 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Clrn1Q8K445 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.59□□□□□ -1.52
Clrn1Q8K445 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Clrn1Q8K445 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Clrn1Q8K445 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Mir449c-201ENSMUST00000102192 109 ntBASIC5.58□□□□□ -1.52
Clrn1Q8K445 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Clrn1Q8K445 Gm22091-201ENSMUST00000116908 127 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms