Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm2914-201ENSMUST00000186120 328 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28604-201ENSMUST00000186629 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28566-201ENSMUST00000186714 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28194-201ENSMUST00000187412 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28886-202ENSMUST00000187889 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29284-201ENSMUST00000188363 255 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28554-202ENSMUST00000189175 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28883-201ENSMUST00000189256 369 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29213-202ENSMUST00000189703 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28851-202ENSMUST00000189757 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28461-201ENSMUST00000190023 484 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm46192-201ENSMUST00000217894 326 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm8137-201ENSMUST00000218997 463 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm22456-201ENSMUST00000082578 125 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm10540-201ENSMUST00000097581 276 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.49□□□□□ -1.37
Brf1Q8CFK2 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm26300-201ENSMUST00000102282 94 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm11825-201ENSMUST00000120710 736 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm11385-201ENSMUST00000121513 570 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Scarna13-201ENSMUST00000158164 275 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm9027-201ENSMUST00000165914 661 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Brf1Q8CFK2 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms