Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Gm23514-201ENSMUST00000082827 130 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup88Q8CEC0 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.1□□□□□ -1.43
Nup88Q8CEC0 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm42535-201ENSMUST00000197312 1399 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm5383-201ENSMUST00000121177 617 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm23441-201ENSMUST00000157268 127 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm22326-201ENSMUST00000158897 351 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm17086-201ENSMUST00000171346 484 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm26731-201ENSMUST00000180683 543 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm27039-201ENSMUST00000182438 962 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm18985-201ENSMUST00000196472 1079 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm21041-201ENSMUST00000214829 823 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup88Q8CEC0 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.09□□□□□ -1.44
Nup88Q8CEC0 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.09□□□□□ -1.44
Nup88Q8CEC0 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm25389-201ENSMUST00000157340 286 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm25348-201ENSMUST00000158961 111 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Mir6374-201ENSMUST00000184003 107 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm19029-201ENSMUST00000189923 564 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm18698-201ENSMUST00000192327 668 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm37030-201ENSMUST00000194254 295 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm37659-201ENSMUST00000194574 111 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm17999-201ENSMUST00000211568 542 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm45789-201ENSMUST00000213038 364 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 AC114573.1-201ENSMUST00000224120 1210 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.08□□□□□ -1.44
Nup88Q8CEC0 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm24429-201ENSMUST00000104076 132 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm12245-201ENSMUST00000117266 357 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm11550-201ENSMUST00000118210 699 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm18117-201ENSMUST00000187720 742 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm5734-201ENSMUST00000189787 913 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm38011-201ENSMUST00000193312 279 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 AC156798.1-201ENSMUST00000220508 224 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms