Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lrif1Q8CDD9 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm6461-201ENSMUST00000120015 633 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm15428-201ENSMUST00000121352 333 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm25430-201ENSMUST00000157614 289 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm21999-201ENSMUST00000165985 387 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm27528-201ENSMUST00000183544 205 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm37445-201ENSMUST00000195318 242 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm8874-201ENSMUST00000196826 286 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Mir20a-201ENSMUST00000083508 107 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Mir337-201ENSMUST00000083592 97 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Mir338-201ENSMUST00000083666 98 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Lrif1Q8CDD9 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm24541-201ENSMUST00000103871 96 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm13537-201ENSMUST00000120467 267 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm12731-201ENSMUST00000120932 268 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm26404-201ENSMUST00000158498 109 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm3307-201ENSMUST00000176164 632 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm29454-201ENSMUST00000190805 393 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm5285-201ENSMUST00000193089 666 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm18036-201ENSMUST00000195256 272 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm44261-201ENSMUST00000203337 209 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm44673-201ENSMUST00000205692 996 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm6776-201ENSMUST00000057752 900 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm24525-201ENSMUST00000082917 151 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Lrif1Q8CDD9 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms