Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm11742-201ENSMUST00000119903 233 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm12332-201ENSMUST00000121397 922 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm11200-201ENSMUST00000121698 448 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm22343-201ENSMUST00000122648 286 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm5777-201ENSMUST00000177265 448 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm28957-201ENSMUST00000190174 373 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm37884-201ENSMUST00000191857 818 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm18426-201ENSMUST00000191874 973 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm45185-201ENSMUST00000207556 404 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm45660-201ENSMUST00000210267 151 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm7040-201ENSMUST00000223271 443 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm4963-201ENSMUST00000072718 378 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.13□□□□□ -1.59
Trub1Q8C0D0 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm8424-201ENSMUST00000117716 988 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm8430-201ENSMUST00000119780 471 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm23250-201ENSMUST00000157444 267 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Mir6343-201ENSMUST00000183584 84 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Mir7653-201ENSMUST00000184358 61 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm37072-201ENSMUST00000194570 837 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm42694-201ENSMUST00000196951 358 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm42428-201ENSMUST00000198677 302 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm19617-201ENSMUST00000202977 308 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Zfp429-203ENSMUST00000224684 524 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm5045-201ENSMUST00000027054 810 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm23514-201ENSMUST00000082827 130 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.12□□□□□ -1.59
Trub1Q8C0D0 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm12752-201ENSMUST00000121657 811 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm16112-201ENSMUST00000159075 382 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm6137-201ENSMUST00000187552 578 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm37614-201ENSMUST00000195645 210 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm8911-201ENSMUST00000213986 652 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm20368-201ENSMUST00000220716 301 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm7822-201ENSMUST00000222433 581 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm5215-201ENSMUST00000054380 405 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm25818-201ENSMUST00000083282 164 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm22741-201ENSMUST00000083438 165 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.11□□□□□ -1.59
Trub1Q8C0D0 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trub1Q8C0D0 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms