Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Ubfd1Q78JW9 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm25919-201ENSMUST00000104271 132 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm23839-201ENSMUST00000116957 109 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm13681-201ENSMUST00000117925 210 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm14989-201ENSMUST00000120497 207 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm13080-201ENSMUST00000120556 420 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm4725-201ENSMUST00000151048 587 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm22693-201ENSMUST00000175049 442 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm25598-201ENSMUST00000179031 107 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Mir6417-201ENSMUST00000183815 116 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm27985-201ENSMUST00000185112 378 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm28503-201ENSMUST00000185966 147 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm37193-201ENSMUST00000193087 513 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm45156-201ENSMUST00000207255 439 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm44773-201ENSMUST00000207374 557 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm4012-201ENSMUST00000221504 581 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC154738.1-201ENSMUST00000227054 368 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubfd1Q78JW9 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm12074-201ENSMUST00000120189 219 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm25102-201ENSMUST00000122479 112 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm23233-201ENSMUST00000157301 137 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm15795-201ENSMUST00000160969 553 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Mir3080-201ENSMUST00000175010 79 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm29284-201ENSMUST00000188363 255 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm2367-201ENSMUST00000192374 472 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ubfd1Q78JW9 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms