Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Snord66-201ENSMUST00000104051 75 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm7363-201ENSMUST00000119883 399 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm15075-201ENSMUST00000122187 477 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm4321-201ENSMUST00000200520 442 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm15905-201ENSMUST00000137042 298 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm16259-201ENSMUST00000145241 553 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm3339-201ENSMUST00000163462 475 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm28116-201ENSMUST00000189064 387 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm20940-201ENSMUST00000197308 360 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm26300-201ENSMUST00000102282 94 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm9308-201ENSMUST00000119073 448 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm11790-201ENSMUST00000119569 455 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm21070-201ENSMUST00000182425 985 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm2623-201ENSMUST00000199229 286 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm43309-201ENSMUST00000200837 458 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.85□□□□□ -1.47
Ccdc88aQ5SNZ0 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm17014-201ENSMUST00000120765 168 ntBASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm17081-201ENSMUST00000167363 478 ntBASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm37492-201ENSMUST00000191948 376 ntBASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms