Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm13195-201ENSMUST00000117229 261 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm12039-201ENSMUST00000118219 180 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm7312-201ENSMUST00000118798 469 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm13787-201ENSMUST00000120422 168 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm7670-201ENSMUST00000121272 641 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm13738-201ENSMUST00000122437 469 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm23993-201ENSMUST00000157478 144 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm23546-201ENSMUST00000158211 137 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm24944-201ENSMUST00000158330 128 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm26731-201ENSMUST00000180683 543 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm44456-201ENSMUST00000196554 89 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm18850-201ENSMUST00000211578 388 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm24763-201ENSMUST00000083688 190 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm25187-201ENSMUST00000083906 133 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Gm9386-201ENSMUST00000095195 381 ntBASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trafd1Q3UDK1 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Mir879-201ENSMUST00000104703 76 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm16179-201ENSMUST00000120685 373 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm4134-201ENSMUST00000173244 563 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm42663-201ENSMUST00000199883 351 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Trafd1Q3UDK1 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm11975-201ENSMUST00000118772 481 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm11677-201ENSMUST00000121349 977 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm6673-201ENSMUST00000166114 700 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm22917-201ENSMUST00000180116 110 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm27528-201ENSMUST00000183544 205 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm9134-201ENSMUST00000193186 551 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms