Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22312-201ENSMUST00000158005 130 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm25013-201ENSMUST00000158402 128 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm24363-201ENSMUST00000158440 311 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm22932-201ENSMUST00000175510 72 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm9892-201ENSMUST00000182415 992 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm27036-201ENSMUST00000182465 980 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm27409-201ENSMUST00000184727 80 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm18117-201ENSMUST00000187720 742 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm21803-201ENSMUST00000188897 693 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm28567-201ENSMUST00000190270 693 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm37044-201ENSMUST00000193531 693 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm38369-201ENSMUST00000195101 693 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm43724-201ENSMUST00000197516 226 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm43054-201ENSMUST00000199495 884 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm42594-201ENSMUST00000199511 246 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm9088-201ENSMUST00000220237 508 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm4052-201ENSMUST00000220890 451 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm23330-201ENSMUST00000082660 164 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm25578-201ENSMUST00000083406 104 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Mir188-201ENSMUST00000083464 68 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col8a1Q00780 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.37□□□□□ -1.55
Col8a1Q00780 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col8a1Q00780 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Mir669i-201ENSMUST00000117007 127 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm14755-201ENSMUST00000118037 384 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm14307-201ENSMUST00000118930 291 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm3835-201ENSMUST00000120752 403 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm13865-201ENSMUST00000120957 865 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm22199-201ENSMUST00000122660 126 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm14297-201ENSMUST00000129110 291 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm23276-201ENSMUST00000157913 138 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm3605-201ENSMUST00000185858 440 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28943-201ENSMUST00000186187 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28736-201ENSMUST00000186257 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29401-201ENSMUST00000186690 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29178-204ENSMUST00000186784 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28589-201ENSMUST00000186991 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28936-201ENSMUST00000187153 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29534-201ENSMUST00000187328 382 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29121-201ENSMUST00000187611 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28243-201ENSMUST00000187801 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28844-202ENSMUST00000187977 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29335-201ENSMUST00000188361 459 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29634-201ENSMUST00000188467 696 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28699-201ENSMUST00000189193 696 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29058-201ENSMUST00000189510 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm29624-201ENSMUST00000190018 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28780-201ENSMUST00000190223 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28969-211ENSMUST00000190992 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28990-207ENSMUST00000191219 615 ntBASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col8a1Q00780 Gm36468-201ENSMUST00000192119 615 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms