Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm5885-202ENSMUST00000203357 528 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 AC121137.1-201ENSMUST00000225272 602 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm10145-201ENSMUST00000077776 462 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm11488-201ENSMUST00000117277 863 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm7449-201ENSMUST00000194393 663 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm8556-201ENSMUST00000210437 664 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Gm13092-201ENSMUST00000136346 260 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC3.35□□□□□ -1.87
PrkdcP97313 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm37914-201ENSMUST00000195317 2679 ntBASIC3.35□□□□□ -1.87
PrkdcP97313 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.35□□□□□ -1.87
PrkdcP97313 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PrkdcP97313 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm14046-201ENSMUST00000119389 509 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm12413-201ENSMUST00000121508 312 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm23098-201ENSMUST00000157552 299 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm6802-202ENSMUST00000186566 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm42579-201ENSMUST00000200512 734 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC3.34□□□□□ -1.87
PrkdcP97313 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Zscan4a-201ENSMUST00000210573 2279 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm45183-201ENSMUST00000207937 1497 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm25764-201ENSMUST00000104092 134 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm11278-201ENSMUST00000121002 997 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm23638-201ENSMUST00000175073 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm23158-201ENSMUST00000175076 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm22907-201ENSMUST00000175198 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm22625-201ENSMUST00000175382 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm22875-201ENSMUST00000175449 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm25197-201ENSMUST00000175516 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm27857-201ENSMUST00000176930 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm26268-201ENSMUST00000177685 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm23681-201ENSMUST00000178821 126 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm27414-201ENSMUST00000185033 381 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm43304-201ENSMUST00000196803 326 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm44214-201ENSMUST00000204153 606 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm7822-201ENSMUST00000222433 581 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 AC129219.1-201ENSMUST00000224336 448 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PrkdcP97313 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PrkdcP97313 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC3.34□□□□□ -1.87
PrkdcP97313 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm43361-201ENSMUST00000196562 4690 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Gm43771-201ENSMUST00000202931 1578 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm42772-201ENSMUST00000199945 3041 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm45853-201ENSMUST00000212310 3171 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PrkdcP97313 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PrkdcP97313 AC154227.1-201ENSMUST00000228809 2467 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Gm37925-201ENSMUST00000195352 4255 ntBASIC3.34□□□□□ -1.87
PrkdcP97313 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms