Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Mir449c-201ENSMUST00000102192 109 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm23294-201ENSMUST00000104150 164 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm12643-201ENSMUST00000116078 374 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm11227-201ENSMUST00000119774 471 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm13991-201ENSMUST00000120190 648 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm13092-201ENSMUST00000136346 260 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm26353-201ENSMUST00000158224 255 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm17164-201ENSMUST00000169013 506 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm20526-201ENSMUST00000173416 158 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm24812-201ENSMUST00000175315 284 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm27348-201ENSMUST00000184511 170 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm38234-201ENSMUST00000195204 421 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm5990-201ENSMUST00000203126 746 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm30646-201ENSMUST00000207662 180 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Hmgb1P63158 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 AC154424.1-201ENSMUST00000225883 799 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm6462-201ENSMUST00000081488 304 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm25004-201ENSMUST00000083811 161 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.42□□□□□ -1.38
Hmgb1P63158 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb1P63158 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb1P63158 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Hmgb1P63158 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm12653-201ENSMUST00000117778 561 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm13669-201ENSMUST00000122366 457 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm25013-201ENSMUST00000158402 128 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm24875-201ENSMUST00000158888 104 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm18354-201ENSMUST00000173515 1068 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm25944-201ENSMUST00000178758 94 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm6631-201ENSMUST00000193699 559 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm22711-202ENSMUST00000197029 135 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm43233-201ENSMUST00000200491 616 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 AC153899.1-201ENSMUST00000214092 1117 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm18338-201ENSMUST00000222381 560 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb1P63158 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb1P63158 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb1P63158 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb1P63158 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb1P63158 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms