Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm22122-201ENSMUST00000175147 200 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm24407-201ENSMUST00000177864 141 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm22392-201ENSMUST00000177971 107 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm8581-201ENSMUST00000188636 890 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm29376-201ENSMUST00000189357 835 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm37193-201ENSMUST00000193087 513 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm38670-201ENSMUST00000199248 77 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm9245-201ENSMUST00000200528 983 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm4374-201ENSMUST00000204929 424 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm45249-201ENSMUST00000211021 348 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxc11P31313 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm6776-201ENSMUST00000057752 900 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm25682-201ENSMUST00000083942 164 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxc11P31313 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxc11P31313 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.43□□□□□ -1.54
Hoxc11P31313 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm13579-201ENSMUST00000118519 517 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 H3f3c-201ENSMUST00000119459 411 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm15103-201ENSMUST00000119893 871 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm14383-201ENSMUST00000121637 386 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm7309-201ENSMUST00000121670 581 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm24186-201ENSMUST00000157983 127 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm36985-201ENSMUST00000195595 379 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm43779-201ENSMUST00000196691 829 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm43467-201ENSMUST00000197441 437 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm43554-201ENSMUST00000199987 186 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm4874-201ENSMUST00000203589 691 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Hoxc11P31313 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm7768-201ENSMUST00000222988 597 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm10064-201ENSMUST00000071235 399 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm24525-201ENSMUST00000082917 151 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.42□□□□□ -1.54
Hoxc11P31313 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Hoxc11P31313 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc11P31313 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms