Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11196-201ENSMUST00000119052 395 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm14805-201ENSMUST00000120172 340 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm15388-201ENSMUST00000121578 726 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm25176-201ENSMUST00000122640 125 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm24371-201ENSMUST00000122662 267 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm23896-201ENSMUST00000158109 130 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm8256-201ENSMUST00000169178 453 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm18802-201ENSMUST00000186270 888 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm29148-201ENSMUST00000188140 336 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm10048-201ENSMUST00000194196 372 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm4321-201ENSMUST00000200520 442 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm44431-201ENSMUST00000203500 413 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC4.03□□□□□ -1.76
Hmgb3O54879 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Olfr519-201ENSMUST00000084752 960 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.03□□□□□ -1.76
Hmgb3O54879 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hmgb3O54879 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmgb3O54879 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm13681-201ENSMUST00000117925 210 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm13491-201ENSMUST00000118267 235 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm16418-201ENSMUST00000118577 171 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm17014-201ENSMUST00000120765 168 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm22223-201ENSMUST00000157360 125 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm24402-201ENSMUST00000157873 91 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm23408-201ENSMUST00000158523 265 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr331-202ENSMUST00000170501 957 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm26925-201ENSMUST00000182470 957 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm27762-201ENSMUST00000183417 109 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm9569-201ENSMUST00000187492 787 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm18952-201ENSMUST00000194471 846 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm44132-201ENSMUST00000205142 151 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm6171-201ENSMUST00000220760 645 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Hmgb3O54879 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb3O54879 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb3O54879 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms