Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.71□□□□□ -1.49
Ccdc78D3Z5T1 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc78D3Z5T1 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.71□□□□□ -1.49
Ccdc78D3Z5T1 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc78D3Z5T1 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ccdc78D3Z5T1 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm16254-201ENSMUST00000131528 730 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm23534-201ENSMUST00000157539 97 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm27762-201ENSMUST00000183417 109 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm27688-201ENSMUST00000183634 91 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm27551-201ENSMUST00000184258 77 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm27160-201ENSMUST00000184837 199 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm32453-201ENSMUST00000204183 456 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm44307-201ENSMUST00000204466 764 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc78D3Z5T1 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm12641-201ENSMUST00000117874 985 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm14985-201ENSMUST00000118693 786 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm14046-201ENSMUST00000119389 509 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm15828-201ENSMUST00000119911 522 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm11759-201ENSMUST00000121742 464 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm6542-201ENSMUST00000153606 772 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm25846-201ENSMUST00000158013 135 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm25603-201ENSMUST00000158361 105 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Mir3062-201ENSMUST00000174986 105 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm5842-201ENSMUST00000195073 622 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Supt4b-201ENSMUST00000214434 351 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm9512-201ENSMUST00000223112 497 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.7□□□□□ -1.5
Ccdc78D3Z5T1 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Mir292-201ENSMUST00000104847 82 ntBASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm2199-201ENSMUST00000119065 874 ntBASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm11484-201ENSMUST00000119808 338 ntBASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc78D3Z5T1 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms