Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm3091-201ENSMUST00000163408 484 ntBASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm27896-201ENSMUST00000175162 317 ntBASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm22395-201ENSMUST00000177427 96 ntBASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm5252-201ENSMUST00000189030 909 ntBASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm19921-201ENSMUST00000210505 703 ntBASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col4a6B1AVK5 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm37593-201ENSMUST00000191669 3254 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Smc5-206ENSMUST00000226111 3265 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm10087-201ENSMUST00000167650 330 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm20614-201ENSMUST00000177106 632 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm37878-201ENSMUST00000192108 387 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col4a6B1AVK5 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm12112-201ENSMUST00000117772 231 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Mir7062-201ENSMUST00000185038 66 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm27564-201ENSMUST00000185196 96 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm37719-201ENSMUST00000194615 292 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col4a6B1AVK5 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms