Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Scn3aA2ASI5 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scn3aA2ASI5 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm23594-201ENSMUST00000104307 134 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm12039-201ENSMUST00000118219 180 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm13172-201ENSMUST00000118685 256 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm16463-201ENSMUST00000120527 721 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm6051-201ENSMUST00000201529 352 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm4574-201ENSMUST00000207804 542 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm12893-201ENSMUST00000121732 275 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm5353-201ENSMUST00000139800 793 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm24031-201ENSMUST00000083930 131 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scn3aA2ASI5 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm15772-201ENSMUST00000118533 438 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm11584-201ENSMUST00000120636 325 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm26490-201ENSMUST00000157879 140 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm15796-201ENSMUST00000162135 204 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm18150-201ENSMUST00000195341 645 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm44648-201ENSMUST00000208267 329 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm7128-201ENSMUST00000211639 533 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn3aA2ASI5 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm12328-201ENSMUST00000118611 197 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm13132-201ENSMUST00000121194 472 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm23318-201ENSMUST00000158000 108 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm19206-201ENSMUST00000186401 827 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm17915-201ENSMUST00000222077 548 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn3aA2ASI5 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.54□□□□□ -1.52
Scn3aA2ASI5 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms