Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm19936-201ENSMUST00000216414 838 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm22826-201ENSMUST00000083774 165 ntBASIC5.2□□□□□ -1.58
Scn1aA2APX8 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1aA2APX8 Gm12444-201ENSMUST00000121512 877 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm20056-201ENSMUST00000194813 519 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm8891-201ENSMUST00000198546 832 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Snora52-201ENSMUST00000082732 137 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm22899-201ENSMUST00000104540 131 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm15297-201ENSMUST00000117795 290 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm24371-201ENSMUST00000122662 267 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm26098-201ENSMUST00000157247 288 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm23673-201ENSMUST00000157474 298 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm26310-201ENSMUST00000157766 117 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm18117-201ENSMUST00000187720 742 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm29332-201ENSMUST00000190829 227 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm38360-201ENSMUST00000195130 454 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.19□□□□□ -1.58
Scn1aA2APX8 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn1aA2APX8 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm25595-201ENSMUST00000102273 97 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm13132-201ENSMUST00000121194 472 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm26034-201ENSMUST00000158154 116 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm17766-201ENSMUST00000209223 442 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm45610-201ENSMUST00000209227 784 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Zfp389-201ENSMUST00000118425 675 ntBASIC5.18□□□□□ -1.58
Scn1aA2APX8 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn1aA2APX8 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms