Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm12007-201ENSMUST00000120978 597 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm13440-201ENSMUST00000121665 496 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm23837-201ENSMUST00000122656 286 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm23993-201ENSMUST00000157478 144 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm23354-201ENSMUST00000158426 104 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm22361-201ENSMUST00000158435 176 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm10087-201ENSMUST00000167650 330 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm8581-201ENSMUST00000188636 890 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm29454-201ENSMUST00000190805 393 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm44776-201ENSMUST00000207212 381 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm45660-201ENSMUST00000210267 151 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp2aQ9DB34 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm11984-201ENSMUST00000118142 766 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm7973-201ENSMUST00000122107 488 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm13738-201ENSMUST00000122437 469 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm24477-201ENSMUST00000157438 103 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm6673-201ENSMUST00000166114 700 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm29813-201ENSMUST00000195856 447 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm44456-201ENSMUST00000196554 89 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm6049-201ENSMUST00000222369 458 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Mir31-201ENSMUST00000083474 106 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Chmp2aQ9DB34 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 H3f3c-201ENSMUST00000119459 411 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm25389-201ENSMUST00000157340 286 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm22725-201ENSMUST00000158092 110 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm26318-201ENSMUST00000176507 96 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm27688-201ENSMUST00000183634 91 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm28061-201ENSMUST00000189085 807 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm37492-201ENSMUST00000191948 376 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm2623-201ENSMUST00000199229 286 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Gm9038-201ENSMUST00000203400 604 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Olfr151-202ENSMUST00000221099 929 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.28□□□□□ -1.56
Chmp2aQ9DB34 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms