Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.54□□□□□ -1.52
Vps28Q9D1C8 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps28Q9D1C8 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm23883-201ENSMUST00000122686 290 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm26000-201ENSMUST00000157991 107 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm26352-201ENSMUST00000158223 125 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm23115-201ENSMUST00000158480 108 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm20519-201ENSMUST00000173684 359 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Mir3080-201ENSMUST00000175010 79 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm29492-201ENSMUST00000187124 457 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm43554-201ENSMUST00000199987 186 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps28Q9D1C8 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm14831-201ENSMUST00000120253 409 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm15428-201ENSMUST00000121352 333 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm43629-201ENSMUST00000201782 704 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Vps28Q9D1C8 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms