Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.9□□□□□ -1.47
Smc1aQ9CU62 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm11805-201ENSMUST00000121238 600 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm5946-201ENSMUST00000182340 970 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm24949-201ENSMUST00000183609 215 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm18215-201ENSMUST00000204429 798 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm44048-201ENSMUST00000204531 361 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm8911-201ENSMUST00000213986 652 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smc1aQ9CU62 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Mir193b-201ENSMUST00000103784 79 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm15185-201ENSMUST00000117397 746 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm10241-201ENSMUST00000117664 286 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm11212-201ENSMUST00000118337 618 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm15803-201ENSMUST00000120118 394 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm25861-201ENSMUST00000158251 109 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm6872-201ENSMUST00000165001 700 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm18117-201ENSMUST00000187720 742 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm28976-201ENSMUST00000188070 144 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm43631-201ENSMUST00000202011 369 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm19596-201ENSMUST00000203685 739 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm7887-201ENSMUST00000056948 537 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm24919-201ENSMUST00000083020 106 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smc1aQ9CU62 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.88□□□□□ -1.47
Smc1aQ9CU62 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm25595-201ENSMUST00000102273 97 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm9435-201ENSMUST00000120379 877 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm15022-201ENSMUST00000122074 746 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.87□□□□□ -1.47
Smc1aQ9CU62 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Smc1aQ9CU62 Gm8993-201ENSMUST00000182182 983 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms