Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm11633-201ENSMUST00000118176 444 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm4852-201ENSMUST00000121202 729 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm15905-201ENSMUST00000137042 298 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm23925-202ENSMUST00000188429 132 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm28769-201ENSMUST00000190176 615 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm23686-201ENSMUST00000083241 164 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm23972-201ENSMUST00000083322 165 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.28□□□□□ -1.56
Cstf1Q99LC2 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm6062-201ENSMUST00000120462 631 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm17014-201ENSMUST00000120765 168 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm15840-201ENSMUST00000122099 943 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm20519-201ENSMUST00000173684 359 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Rab26os-201ENSMUST00000176215 477 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm29356-201ENSMUST00000186935 373 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm36986-201ENSMUST00000195320 353 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm18329-201ENSMUST00000215832 589 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm6362-201ENSMUST00000217686 836 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.27□□□□□ -1.57
Cstf1Q99LC2 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm14881-201ENSMUST00000120366 372 ntBASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm16114-201ENSMUST00000161930 300 ntBASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Mir6933-201ENSMUST00000184982 81 ntBASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.26□□□□□ -1.57
Cstf1Q99LC2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms