Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm7117-201ENSMUST00000071515 387 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm22266-201ENSMUST00000104011 138 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm13428-201ENSMUST00000117540 365 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm16149-201ENSMUST00000117631 309 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm11631-201ENSMUST00000119220 156 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm25714-201ENSMUST00000158626 296 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm8614-201ENSMUST00000182528 978 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm19104-201ENSMUST00000198392 679 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm43203-201ENSMUST00000200130 558 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm7588-201ENSMUST00000216866 571 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm18899-201ENSMUST00000217663 546 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Zmym2-202ENSMUST00000223669 1281 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc28bQ8CEG5 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14385-201ENSMUST00000116315 876 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14082-201ENSMUST00000118582 801 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm13367-201ENSMUST00000119955 796 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14531-201ENSMUST00000120845 285 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm11341-201ENSMUST00000122316 447 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm17137-202ENSMUST00000165729 957 ntBASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc28bQ8CEG5 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms